Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Pseudoclavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Pseudoclavibacter |
| Species | Pseudoclavibacter sp. AY1H1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
664956 bp
Thymine Count
661191 bp
Guanine Count
1429804 bp
Cytosine Count
1446370 bp
Genome Length
4202523 bp
Protein-coding Genes
3778 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| padr family transcriptional regulator | C5E05_14315 | Not Available | Negative | 3011922 - 3012578 | 23688.8 |
| nudix hydrolase | C5E05_14320 | Not Available | Negative | 3012693 - 3013106 | 14689.7 |
| serine protease | C5E05_14325 | Not Available | Negative | 3013177 - 3014658 | 48699.0 |
| hypothetical protein | C5E05_14330 | Not Available | Negative | 3014728 - 3015024 | 10148.5 |
| hypothetical protein | C5E05_14335 | Not Available | Negative | 3015021 - 3015602 | 20688.4 |
| rna polymerase subunit sigma-70 | C5E05_14340 | Not Available | Negative | 3015593 - 3016141 | 20257.4 |
| amino acid permease | C5E05_14345 | Not Available | Positive | 3016377 - 3017879 | 53879.7 |
| glyceraldehyde-3-phosphate dehydrogenase | C5E05_14350 | Not Available | Negative | 3017959 - 3019410 | 52717.2 |
| ribosome biogenesis gtpase der | C5E05_14355 | Not Available | Negative | 3019610 - 3021157 | 56943.6 |
| (d)cmp kinase | C5E05_14360 | Not Available | Negative | 3021150 - 3021941 | 27704.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
