Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Pseudoclavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Pseudoclavibacter |
| Species | Pseudoclavibacter sp. AY1H1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
664956 bp
Thymine Count
661191 bp
Guanine Count
1429804 bp
Cytosine Count
1446370 bp
Genome Length
4202523 bp
Protein-coding Genes
3778 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucarate dehydratase | C5E05_13655 | Not Available | Negative | 2870934 - 2872262 | 47981.6 |
| lysr family transcriptional regulator | C5E05_13660 | Not Available | Negative | 2872424 - 2873323 | 32490.4 |
| 5-dehydro-4-deoxyglucarate dehydratase | C5E05_13665 | Not Available | Positive | 2873471 - 2874430 | 33894.2 |
| glucarate dehydratase | C5E05_13670 | Not Available | Positive | 2874529 - 2875914 | 48680.4 |
| hydroxyacid dehydrogenase | C5E05_13675 | Not Available | Positive | 2875956 - 2876930 | 34290.4 |
| permease | C5E05_13680 | Not Available | Negative | 2878039 - 2878767 | 24956.6 |
| abc transporter permease | C5E05_13685 | Not Available | Negative | 2878838 - 2879878 | 37307.2 |
| abc transporter permease | C5E05_13690 | Not Available | Negative | 2879871 - 2880899 | 36543.4 |
| peptide abc transporter substrate-binding protein | C5E05_13695 | Not Available | Negative | 2880934 - 2882553 | 57362.7 |
| hydroxyacid dehydrogenase | C5E05_13700 | Not Available | Positive | 2882830 - 2883855 | 35904.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
