Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Pseudoclavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Pseudoclavibacter |
| Species | Pseudoclavibacter sp. AY1H1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
664956 bp
Thymine Count
661191 bp
Guanine Count
1429804 bp
Cytosine Count
1446370 bp
Genome Length
4202523 bp
Protein-coding Genes
3778 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| copper transporter | C5E05_12280 | Not Available | Negative | 2587862 - 2589889 | 73187.5 |
| integration host factor | C5E05_12285 | Not Available | Negative | 2590141 - 2590428 | 9637.56 |
| amp-dependent synthetase | C5E05_12290 | Not Available | Negative | 2590685 - 2592403 | 63382.9 |
| hypothetical protein | C5E05_12295 | Not Available | Negative | 2592415 - 2592750 | 11989.5 |
| redox-sensitive transcriptional activator soxr | C5E05_12300 | Not Available | Negative | 2592666 - 2593070 | 14935.1 |
| flavin oxidoreductase | C5E05_12305 | Not Available | Positive | 2593273 - 2593812 | 18675.1 |
| superoxide dismutase | C5E05_12310 | Not Available | Positive | 2593937 - 2594560 | 22720.6 |
| hypothetical protein | C5E05_12315 | Not Available | Positive | 2594655 - 2595425 | 27156.7 |
| hypothetical protein | C5E05_12320 | Not Available | Negative | 2595735 - 2596580 | 29499.2 |
| hypothetical protein | C5E05_12325 | Not Available | Negative | 2596819 - 2597703 | 31703.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
