Pseudoclavibacter sp. AY1H1

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Pseudoclavibacter

Description

Pseudoclavibacter sp. AY1H1 is a notable bacterium characterized by its single replicon structure, indicating a streamlined genomic organization. The genomic sequence of this organism is cataloged under the accession number PSXX00000000.1, which provides a reference point for studies pertaining to its genetic makeup. The classification of Pseudoclavibacter sp. suggests a relationship with other members of the Actinobacteria phylum, known for their diverse metabolic capabilities and ecological roles. Although specific traits regarding its metabolic pathways or ecological interactions are not provided, members of this genus typically participate in soil and plant-associated environments, which could imply potential interactions with plant systems or contributions to soil health. In summary, Pseudoclavibacter sp. AY1H1 is distinguished by its singular replicon and accession number PSXX00000000.1. While further details about its ecological roles remain unspecified, the characteristics of the Pseudoclavibacter genus suggest potential significance in environmental microbiology, particularly in soil ecosystems. This highlights the importance of studying such organisms to better understand their contributions to biogeochemical cycles and plant health.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusPseudoclavibacter
SpeciesPseudoclavibacter sp. AY1H1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoclavibacter sp. AY1H1 AY1H1_26, whole genome shotgun

Gene Summary

Adenine Count

664956 bp

Thymine Count

661191 bp

Guanine Count

1429804 bp

Cytosine Count

1446370 bp

Genome Length

4202523 bp

Protein-coding Genes

3778 genes

Non-Coding Genes

104 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
formaldehyde dehydrogenase, glutathione-independentC5E05_12225Not AvailableNegative2576117 - 257733142292.5
nad(p)-dependent oxidoreductaseC5E05_12230Not AvailablePositive2577590 - 257844729489.5
fad-dependent oxidoreductaseC5E05_12235Not AvailableNegative2578645 - 257982042011.7
tetr family transcriptional regulatorC5E05_12240Not AvailablePositive2579874 - 258041619488.3
amino acid transporterC5E05_12245Not AvailablePositive2580598 - 258212154529.1
atp-binding proteinC5E05_12250Not AvailablePositive2582248 - 258348644518.7
ribokinaseC5E05_12255Not AvailableNegative2583732 - 258466131025.5
hypothetical proteinC5E05_12260Not AvailableNegative2584658 - 258506814745.1
polyisoprenoid-binding proteinC5E05_12270Not AvailableNegative2585852 - 258640919751.0
helicaseC5E05_12275Not AvailableNegative2586576 - 258786547803.7

Displaying genes 2421 – 2430 of 3882 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.