Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Pseudoclavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Pseudoclavibacter |
| Species | Pseudoclavibacter sp. AY1H1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
664956 bp
Thymine Count
661191 bp
Guanine Count
1429804 bp
Cytosine Count
1446370 bp
Genome Length
4202523 bp
Protein-coding Genes
3778 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine phosphatase family protein | C5E05_11975 | Not Available | Positive | 2523221 - 2523781 | 19610.3 |
| aldo/keto reductase | C5E05_11980 | Not Available | Positive | 2523859 - 2524911 | 37811.6 |
| hypothetical protein | C5E05_11985 | Not Available | Positive | 2525056 - 2526435 | 49988.0 |
| hypothetical protein | C5E05_11990 | Not Available | Positive | 2526428 - 2527471 | 37364.5 |
| cpbp family intramembrane metalloprotease domain-containing protein | C5E05_11995 | Not Available | Positive | 2527624 - 2528610 | 34947.8 |
| hypothetical protein | C5E05_12000 | Not Available | Positive | 2528728 - 2529159 | 15641.2 |
| iclr family transcriptional regulator | C5E05_12005 | Not Available | Positive | 2529209 - 2530012 | 28598.4 |
| hydroxymethylglutaryl-coa lyase | C5E05_12010 | Not Available | Negative | 2530022 - 2530954 | 32923.1 |
| formyl-coa transferase | C5E05_12015 | Not Available | Negative | 2530951 - 2532201 | 44271.7 |
| gluconate permease | C5E05_12020 | Not Available | Negative | 2532241 - 2533689 | 49453.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
