Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Pseudoclavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Pseudoclavibacter |
| Species | Pseudoclavibacter sp. AY1H1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
664956 bp
Thymine Count
661191 bp
Guanine Count
1429804 bp
Cytosine Count
1446370 bp
Genome Length
4202523 bp
Protein-coding Genes
3778 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | C5E05_10345 | Not Available | Negative | 2201770 - 2202651 | 31229.2 |
| sarcosine oxidase | C5E05_10350 | Not Available | Positive | 2202767 - 2203918 | 40657.7 |
| allantoate amidohydrolase | C5E05_10355 | Not Available | Positive | 2203915 - 2205177 | 44044.7 |
| recombinase | C5E05_10360 | Not Available | Positive | 2205720 - 2206406 | 25960.5 |
| nadph:quinone reductase | C5E05_10365 | Not Available | Positive | 2206563 - 2207525 | 33811.4 |
| gntr family transcriptional regulator | C5E05_10370 | Not Available | Negative | 2207547 - 2208215 | 23755.4 |
| 2-isopropylmalate synthase | C5E05_10375 | Not Available | Positive | 2208401 - 2210182 | 65940.2 |
| 50s ribosomal protein l1 | C5E05_10380 | Not Available | Negative | 2210283 - 2210969 | 23914.7 |
| 50s ribosomal protein l11 | C5E05_10385 | Not Available | Negative | 2211073 - 2211504 | 15034.3 |
| transcription termination/antitermination protein nusg | C5E05_10390 | Not Available | Negative | 2211618 - 2212547 | 34418.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
