Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Pseudoclavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Pseudoclavibacter |
| Species | Pseudoclavibacter sp. AY1H1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
664956 bp
Thymine Count
661191 bp
Guanine Count
1429804 bp
Cytosine Count
1446370 bp
Genome Length
4202523 bp
Protein-coding Genes
3778 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protocatechuate 3,4-dioxygenase subunit alpha | C5E05_08410 | Not Available | Negative | 1780104 - 1780691 | 21085.5 |
| protocatechuate 3,4-dioxygenase subunit beta | C5E05_08415 | Not Available | Negative | 1780684 - 1781487 | 30067.0 |
| 4-hydroxybenzoate 3-monooxygenase | C5E05_08420 | Not Available | Negative | 1781484 - 1782758 | 46357.2 |
| hypothetical protein | C5E05_08425 | Not Available | Positive | 1783164 - 1783931 | 29476.7 |
| transcriptional regulator | C5E05_08430 | Not Available | Positive | 1784196 - 1785464 | 46247.1 |
| hypothetical protein | C5E05_08435 | Not Available | Negative | 1785549 - 1785785 | 8633.07 |
| hypothetical protein | C5E05_08440 | Not Available | Negative | 1785785 - 1786030 | 8647.88 |
| mfs transporter | C5E05_08445 | Not Available | Negative | 1787330 - 1788631 | 44496.1 |
| tetr family transcriptional regulator | C5E05_08450 | Not Available | Positive | 1788652 - 1789215 | 20647.8 |
| hypothetical protein | C5E05_08455 | Not Available | Negative | 1789584 - 1789772 | 5925.71 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
