Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Pseudoclavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Pseudoclavibacter |
| Species | Pseudoclavibacter sp. AY1H1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
664956 bp
Thymine Count
661191 bp
Guanine Count
1429804 bp
Cytosine Count
1446370 bp
Genome Length
4202523 bp
Protein-coding Genes
3778 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | C5E05_08360 | Not Available | Negative | 1768778 - 1769464 | 24678.3 |
| apc family permease | C5E05_08365 | Not Available | Positive | 1769719 - 1771104 | 49286.9 |
| cytosine deaminase | C5E05_08370 | Not Available | Positive | 1771167 - 1772237 | 37753.5 |
| hypothetical protein | C5E05_08375 | Not Available | Positive | 1772234 - 1773520 | 42773.1 |
| 3-oxoacyl-acp reductase | C5E05_08380 | Not Available | Negative | 1773434 - 1774150 | 23829.5 |
| acetyl-coa c-acyltransferase | C5E05_08385 | Not Available | Negative | 1774944 - 1776158 | 41438.6 |
| succinyl-coa--3-ketoacid-coa transferase | C5E05_08390 | Not Available | Negative | 1776155 - 1776811 | 22612.3 |
| succinyl-coa--3-ketoacid-coa transferase | C5E05_08395 | Not Available | Negative | 1776811 - 1777626 | 28563.9 |
| 4-carboxymuconolactone decarboxylase | C5E05_08400 | Not Available | Negative | 1777619 - 1778875 | 43654.5 |
| hypothetical protein | C5E05_08405 | Not Available | Negative | 1778872 - 1780107 | 42622.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
