Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Pseudoclavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Pseudoclavibacter |
| Species | Pseudoclavibacter sp. AY1H1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
664956 bp
Thymine Count
661191 bp
Guanine Count
1429804 bp
Cytosine Count
1446370 bp
Genome Length
4202523 bp
Protein-coding Genes
3778 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C5E05_08210 | Not Available | Positive | 1734880 - 1735296 | 15396.2 |
| choline dehydrogenase | C5E05_08215 | Not Available | Negative | 1735423 - 1737003 | 56085.6 |
| mfs transporter | C5E05_08220 | Not Available | Negative | 1737053 - 1738555 | 51487.3 |
| hypothetical protein | C5E05_08225 | Not Available | Negative | 1738717 - 1739505 | 27173.3 |
| gfo/idh/moca family oxidoreductase | C5E05_08230 | Not Available | Negative | 1739553 - 1740590 | 36352.4 |
| rok family protein | C5E05_08235 | Not Available | Positive | 1740702 - 1741979 | 45282.3 |
| hypothetical protein | C5E05_08240 | Not Available | Positive | 1742128 - 1742529 | 14420.5 |
| restriction endonuclease subunit r | C5E05_08245 | Not Available | Positive | 1742526 - 1743542 | 36342.9 |
| ap endonuclease | C5E05_08250 | Not Available | Negative | 1743636 - 1744646 | 38318.6 |
| dehydrogenase | C5E05_08255 | Not Available | Negative | 1744734 - 1745888 | 41118.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
