Pseudoclavibacter sp. AY1H1

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Pseudoclavibacter

Description

Pseudoclavibacter sp. AY1H1 is a notable bacterium characterized by its single replicon structure, indicating a streamlined genomic organization. The genomic sequence of this organism is cataloged under the accession number PSXX00000000.1, which provides a reference point for studies pertaining to its genetic makeup. The classification of Pseudoclavibacter sp. suggests a relationship with other members of the Actinobacteria phylum, known for their diverse metabolic capabilities and ecological roles. Although specific traits regarding its metabolic pathways or ecological interactions are not provided, members of this genus typically participate in soil and plant-associated environments, which could imply potential interactions with plant systems or contributions to soil health. In summary, Pseudoclavibacter sp. AY1H1 is distinguished by its singular replicon and accession number PSXX00000000.1. While further details about its ecological roles remain unspecified, the characteristics of the Pseudoclavibacter genus suggest potential significance in environmental microbiology, particularly in soil ecosystems. This highlights the importance of studying such organisms to better understand their contributions to biogeochemical cycles and plant health.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusPseudoclavibacter
SpeciesPseudoclavibacter sp. AY1H1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoclavibacter sp. AY1H1 AY1H1_26, whole genome shotgun

Gene Summary

Adenine Count

664956 bp

Thymine Count

661191 bp

Guanine Count

1429804 bp

Cytosine Count

1446370 bp

Genome Length

4202523 bp

Protein-coding Genes

3778 genes

Non-Coding Genes

104 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
l-lactate permeaseC5E05_08010Not AvailableNegative1698606 - 170021655658.8
o-acetyl-adp-ribose deacetylaseC5E05_08015Not AvailablePositive1700451 - 170096017659.8
glycerate kinaseC5E05_08020Not AvailableNegative1700995 - 170216738941.4
laci family transcriptional regulatorC5E05_08025Not AvailablePositive1702269 - 170330636611.4
oxidoreductaseC5E05_08030Not AvailablePositive1703505 - 170466242893.4
dihydrodipicolinate synthase family proteinC5E05_08035Not AvailablePositive1704659 - 170588243808.6
xylose isomeraseC5E05_08040Not AvailablePositive1705879 - 170675730859.3
abc transporter atp-binding proteinC5E05_08045Not AvailableNegative1706992 - 170781630274.6
sulfonate abc transporter substrate-binding proteinC5E05_08050Not AvailableNegative1707813 - 170886236104.8
abc transporter permeaseC5E05_08055Not AvailableNegative1708925 - 170977330207.5

Displaying genes 1591 – 1600 of 3882 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.