Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Pseudoclavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Pseudoclavibacter |
| Species | Pseudoclavibacter sp. AY1H1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
664956 bp
Thymine Count
661191 bp
Guanine Count
1429804 bp
Cytosine Count
1446370 bp
Genome Length
4202523 bp
Protein-coding Genes
3778 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (guanosine(37)-n1)-methyltransferase trmd | C5E05_07450 | Not Available | Negative | 1567374 - 1568129 | 27710.7 |
| ribosome maturation factor rimm | C5E05_07455 | Not Available | Negative | 1568203 - 1568820 | 21989.7 |
| kh domain-containing protein | C5E05_07460 | Not Available | Negative | 1568858 - 1569088 | 8254.89 |
| 30s ribosomal protein s16 | C5E05_07465 | Not Available | Negative | 1569091 - 1569504 | 14977.8 |
| hypothetical protein | C5E05_07470 | Not Available | Negative | 1569649 - 1569858 | 7369.73 |
| glutamate--cysteine ligase | C5E05_07475 | Not Available | Positive | 1569937 - 1571082 | 42194.6 |
| 5-dehydro-2-deoxygluconokinase | C5E05_07480 | Not Available | Positive | 1571201 - 1572169 | 34435.8 |
| deoxyribose-phosphate aldolase | C5E05_07485 | Not Available | Positive | 1572162 - 1573070 | 32098.3 |
| methylmalonate-semialdehyde dehydrogenase (coa acylating) | C5E05_07490 | Not Available | Positive | 1573159 - 1574682 | 54103.2 |
| 5-deoxy-glucuronate isomerase | C5E05_07495 | Not Available | Positive | 1574777 - 1575706 | 33438.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
