Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Pseudoclavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Pseudoclavibacter |
| Species | Pseudoclavibacter sp. AY1H1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
664956 bp
Thymine Count
661191 bp
Guanine Count
1429804 bp
Cytosine Count
1446370 bp
Genome Length
4202523 bp
Protein-coding Genes
3778 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cof-type had-iib family hydrolase | C5E05_00100 | Not Available | Negative | 24672 - 25562 | 30863.6 |
| isochorismatase | C5E05_00105 | Not Available | Negative | 25528 - 26175 | 22611.9 |
| arac family transcriptional regulator | C5E05_00110 | Not Available | Positive | 26316 - 27260 | 33547.7 |
| nitrite reductase (nad(p)h) | C5E05_00115 | Not Available | Positive | 27551 - 30136 | 90475.9 |
| nitrite reductase (nad(p)h) small subunit | C5E05_00120 | Not Available | Positive | 30133 - 30522 | 13676.4 |
| uroporphyrinogen-iii c-methyltransferase | C5E05_00125 | Not Available | Positive | 30519 - 31754 | 42827.3 |
| uroporphyrinogen-iii synthase | C5E05_00130 | Not Available | Positive | 31751 - 32932 | 41301.1 |
| cobalamin biosynthesis protein cbix | C5E05_00135 | Not Available | Positive | 32960 - 33673 | 24740.5 |
| formate transporter | C5E05_00140 | Not Available | Positive | 33823 - 34677 | 29996.6 |
| phosphogluconate dehydrogenase (nadp(+)-dependent, decarboxylating) | C5E05_00145 | Not Available | Negative | 34947 - 36419 | 52017.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
