Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Pseudoclavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Pseudoclavibacter |
| Species | Pseudoclavibacter sp. AY1F1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
675024 bp
Thymine Count
677738 bp
Guanine Count
1377567 bp
Cytosine Count
1366552 bp
Genome Length
4097181 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C5B85_04685 | Not Available | Positive | 1019223 - 1019945 | 23767.6 |
| class f sortase | C5B85_04690 | Not Available | Positive | 1019963 - 1020631 | 22265.3 |
| rna polymerase subunit sigma-70 | C5B85_04695 | Not Available | Positive | 1021005 - 1021568 | 21006.0 |
| 2-deoxy-d-gluconate 3-dehydrogenase | C5B85_04700 | Not Available | Negative | 1021675 - 1022418 | 26045.0 |
| c-terminal binding protein | C5B85_04705 | Not Available | Negative | 1022411 - 1023415 | 35313.4 |
| iclr family transcriptional regulator | C5B85_04710 | Not Available | Negative | 1023500 - 1024354 | 30972.2 |
| hypothetical protein | C5B85_04715 | Not Available | Positive | 1024501 - 1024866 | 13009.3 |
| hypothetical protein | C5B85_04720 | Not Available | Positive | 1024863 - 1026641 | 63674.7 |
| spermidine/putrescine abc transporter atp-binding protein | C5B85_04725 | Not Available | Positive | 1026638 - 1027768 | 40456.1 |
| hypothetical protein | C5B85_04730 | Not Available | Positive | 1027792 - 1028892 | 38951.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
