Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Pseudoclavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Pseudoclavibacter |
| Species | Pseudoclavibacter sp. AY1F1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
675024 bp
Thymine Count
677738 bp
Guanine Count
1377567 bp
Cytosine Count
1366552 bp
Genome Length
4097181 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine--trna ligase | C5B85_00355 | Not Available | Positive | 72195 - 73613 | 50946.3 |
| 23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmb | C5B85_00360 | Not Available | Positive | 73610 - 74605 | 35202.4 |
| hypothetical protein | C5B85_00365 | Not Available | Negative | 74690 - 76045 | 46642.8 |
| tigr03943 family protein | C5B85_00370 | Not Available | Negative | 76113 - 76946 | 29857.6 |
| hypothetical protein | C5B85_00375 | Not Available | Negative | 76939 - 77994 | 37368.8 |
| Trna-thr | Not Available | Not Available | Positive | 78127 - 78202 | Not Available |
| peptide-methionine (r)-s-oxide reductase | C5B85_00385 | Not Available | Negative | 78284 - 78700 | 15289.7 |
| hypothetical protein | C5B85_00390 | Not Available | Positive | 78806 - 79099 | 11252.4 |
| hypothetical protein | C5B85_00395 | Not Available | Positive | 79032 - 79655 | 21112.8 |
| cold-shock protein | C5B85_00400 | Not Available | Positive | 79920 - 80135 | 7710.06 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
