Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Pseudoclavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Pseudoclavibacter |
| Species | Pseudoclavibacter sp. AY1F1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
675024 bp
Thymine Count
677738 bp
Guanine Count
1377567 bp
Cytosine Count
1366552 bp
Genome Length
4097181 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucose-6-phosphate dehydrogenase | C5B85_03925 | Not Available | Negative | 852286 - 853827 | 57384.8 |
| glucose-6-phosphate isomerase | C5B85_03930 | Not Available | Negative | 853937 - 855523 | 53988.7 |
| transaldolase | C5B85_03935 | Not Available | Negative | 855535 - 856653 | 39552.6 |
| transketolase | C5B85_03940 | Not Available | Negative | 856710 - 858800 | 74799.5 |
| protoheme ix farnesyltransferase | C5B85_03945 | Not Available | Positive | 859020 - 859946 | 33681.1 |
| heme a synthase | C5B85_03950 | Not Available | Negative | 860085 - 860990 | 31596.6 |
| fe-s cluster assembly protein sufb | C5B85_03955 | Not Available | Positive | 861314 - 862732 | 52737.4 |
| fe-s cluster assembly protein sufd | C5B85_03960 | Not Available | Positive | 862733 - 863938 | 43694.0 |
| non-heme iron oxygenase ferredoxin subunit | C5B85_03965 | Not Available | Positive | 863935 - 864267 | 12206.3 |
| fe-s cluster assembly atpase sufc | C5B85_03970 | Not Available | Positive | 864271 - 865035 | 27736.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
