Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Pseudoclavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Pseudoclavibacter |
| Species | Pseudoclavibacter sp. AY1F1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
675024 bp
Thymine Count
677738 bp
Guanine Count
1377567 bp
Cytosine Count
1366552 bp
Genome Length
4097181 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s4 | C5B85_03525 | Not Available | Positive | 760489 - 761118 | 23712.0 |
| duf948 domain-containing protein | C5B85_03530 | Not Available | Positive | 761316 - 761729 | 13890.0 |
| hypothetical protein | C5B85_03535 | Not Available | Positive | 761768 - 761962 | 6651.95 |
| alanine--trna ligase | C5B85_03540 | Not Available | Positive | 762033 - 764702 | 95652.2 |
| holliday junction resolvase ruvx | C5B85_03545 | Not Available | Positive | 764695 - 765201 | 17819.2 |
| endolytic transglycosylase mltg | C5B85_03550 | Not Available | Positive | 765146 - 766399 | 44578.0 |
| shikimate dehydrogenase | C5B85_03555 | Not Available | Positive | 766377 - 767282 | 31742.0 |
| chorismate synthase | C5B85_03560 | Not Available | Positive | 767287 - 768558 | 44808.6 |
| shikimate kinase | C5B85_03565 | Not Available | Positive | 768555 - 769070 | 18728.3 |
| 3-dehydroquinate synthase | C5B85_03570 | Not Available | Positive | 768967 - 770145 | 42004.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
