Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Pseudoclavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Pseudoclavibacter |
| Species | Pseudoclavibacter sp. AY1F1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
675024 bp
Thymine Count
677738 bp
Guanine Count
1377567 bp
Cytosine Count
1366552 bp
Genome Length
4097181 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase m16 | C5B85_02420 | Not Available | Positive | 517226 - 518575 | 48733.6 |
| histidine phosphatase family protein | C5B85_02425 | Not Available | Positive | 518575 - 519174 | 21889.7 |
| 4-hydroxy-tetrahydrodipicolinate reductase | C5B85_02430 | Not Available | Positive | 519249 - 519986 | 25666.6 |
| hypothetical protein | C5B85_02435 | Not Available | Positive | 520064 - 520444 | 13943.0 |
| tigr01777 family protein | C5B85_02440 | Not Available | Negative | 520458 - 521411 | 34252.0 |
| coproporphyrinogen iii oxidase | C5B85_02445 | Not Available | Positive | 521567 - 522763 | 43553.7 |
| hypothetical protein | C5B85_02450 | Not Available | Negative | 522797 - 523414 | 22204.3 |
| heat-inducible transcriptional repressor hrca | C5B85_02455 | Not Available | Positive | 523568 - 524599 | 37511.8 |
| molecular chaperone dnaj | C5B85_02460 | Not Available | Positive | 524688 - 525773 | 39124.1 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | C5B85_02465 | Not Available | Positive | 525775 - 526545 | 27056.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
