Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Pseudoclavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Pseudoclavibacter |
| Species | Pseudoclavibacter sp. AY1F1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
675024 bp
Thymine Count
677738 bp
Guanine Count
1377567 bp
Cytosine Count
1366552 bp
Genome Length
4097181 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| proline--trna ligase | C5B85_02320 | Not Available | Positive | 493249 - 495027 | 63982.3 |
| transcription elongation factor nusa | C5B85_02325 | Not Available | Positive | 495157 - 496176 | 36821.9 |
| duf448 domain-containing protein | C5B85_02330 | Not Available | Positive | 496178 - 496477 | 11020.4 |
| translation initiation factor if-2 | C5B85_02335 | Not Available | Positive | 496556 - 499414 | 98609.4 |
| 30s ribosome-binding factor rbfa | C5B85_02340 | Not Available | Positive | 499564 - 499998 | 15809.6 |
| adenine glycosylase | C5B85_02345 | Not Available | Negative | 500058 - 501038 | 35738.9 |
| trna pseudouridine(55) synthase trub | C5B85_02350 | Not Available | Positive | 502064 - 502987 | 31834.2 |
| hypothetical protein | C5B85_02355 | Not Available | Positive | 502984 - 503370 | 13710.3 |
| hypothetical protein | C5B85_02360 | Not Available | Positive | 503367 - 503816 | 16087.6 |
| bifunctional riboflavin kinase/fad synthetase | C5B85_02365 | Not Available | Positive | 503800 - 504759 | 34312.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
