Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Pseudoclavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Pseudoclavibacter |
| Species | Pseudoclavibacter sp. AY1F1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
675024 bp
Thymine Count
677738 bp
Guanine Count
1377567 bp
Cytosine Count
1366552 bp
Genome Length
4097181 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| llm class flavin-dependent oxidoreductase | C5B85_17875 | Not Available | Negative | 3862582 - 3863649 | 38995.0 |
| hypothetical protein | C5B85_17880 | Not Available | Negative | 3863646 - 3864512 | 31102.2 |
| ammonia channel protein | C5B85_17885 | Not Available | Positive | 3864748 - 3866016 | 43269.1 |
| hypothetical protein | C5B85_17890 | Not Available | Positive | 3866160 - 3866735 | 21304.7 |
| atp-dependent dna ligase | C5B85_17895 | Not Available | Positive | 3866810 - 3867115 | 11206.3 |
| hypothetical protein | C5B85_17900 | Not Available | Negative | 3867133 - 3868395 | 43643.8 |
| hypothetical protein | C5B85_17905 | Not Available | Negative | 3868496 - 3869173 | 23633.1 |
| ligand-binding protein sh3 | C5B85_17910 | Not Available | Negative | 3869496 - 3869867 | 12703.8 |
| ligand-binding protein sh3 | C5B85_17915 | Not Available | Negative | 3869870 - 3870184 | 10916.0 |
| amino acid permease | C5B85_17920 | Not Available | Positive | 3870573 - 3871988 | 48698.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
