Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Pseudoclavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Pseudoclavibacter |
| Species | Pseudoclavibacter sp. AY1F1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
675024 bp
Thymine Count
677738 bp
Guanine Count
1377567 bp
Cytosine Count
1366552 bp
Genome Length
4097181 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| had family hydrolase | C5B85_15775 | Not Available | Positive | 3392663 - 3393526 | 31576.1 |
| alpha-hydroxy-acid oxidizing protein | C5B85_15780 | Not Available | Negative | 3393901 - 3395160 | 45644.2 |
| rhamnulokinase | C5B85_15785 | Not Available | Negative | 3395180 - 3396661 | 52252.0 |
| bifunctional rhamnulose-1-phosphate aldolase/short-chain dehydrogenase | C5B85_15790 | Not Available | Negative | 3396658 - 3398694 | 71666.8 |
| l-rhamnose isomerase | C5B85_15795 | Not Available | Negative | 3398753 - 3399919 | 42922.5 |
| fusc family protein | C5B85_15800 | Not Available | Positive | 3400237 - 3401268 | 35892.3 |
| mfs transporter | C5B85_15805 | Not Available | Positive | 3401390 - 3402730 | 47583.6 |
| gfo/idh/moca family oxidoreductase | C5B85_15810 | Not Available | Positive | 3402849 - 3403916 | 37903.5 |
| hypothetical protein | C5B85_15815 | Not Available | Positive | 3403913 - 3404752 | 30201.4 |
| laci family transcriptional regulator | C5B85_15820 | Not Available | Positive | 3404854 - 3405864 | 36120.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
