Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Pseudoclavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Pseudoclavibacter |
| Species | Pseudoclavibacter sp. AY1F1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
675024 bp
Thymine Count
677738 bp
Guanine Count
1377567 bp
Cytosine Count
1366552 bp
Genome Length
4097181 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bacteriocin-protection protein, ydei/ompd-associated family | C5B85_14540 | Not Available | Negative | 3139982 - 3140554 | 21343.5 |
| manganese transporter | C5B85_14545 | Not Available | Negative | 3140737 - 3142038 | 45310.2 |
| dihydrodipicolinate synthase family protein | C5B85_14550 | Not Available | Negative | 3142232 - 3143167 | 33911.2 |
| laci family transcriptional regulator | C5B85_14555 | Not Available | Positive | 3143364 - 3144407 | 36709.9 |
| tetr family transcriptional regulator | C5B85_14560 | Not Available | Negative | 3144595 - 3145149 | 19819.4 |
| mfs transporter | C5B85_14565 | Not Available | Positive | 3145264 - 3146724 | 50537.6 |
| 6-phosphofructokinase | C5B85_14570 | Not Available | Positive | 3146907 - 3147935 | 36550.8 |
| hypothetical protein | C5B85_14575 | Not Available | Negative | 3148043 - 3148549 | 18427.6 |
| phosphoribosylformylglycinamidine synthase subunit purq | C5B85_14580 | Not Available | Negative | 3148583 - 3149287 | 24926.6 |
| phosphoribosylformylglycinamidine synthase | C5B85_14585 | Not Available | Negative | 3149284 - 3149649 | 12811.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
