Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Pseudoclavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Pseudoclavibacter |
| Species | Pseudoclavibacter sp. AY1F1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
675024 bp
Thymine Count
677738 bp
Guanine Count
1377567 bp
Cytosine Count
1366552 bp
Genome Length
4097181 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dehydrogenase | C5B85_13755 | Not Available | Negative | 2973044 - 2974057 | 35107.8 |
| mfs transporter | C5B85_13760 | Not Available | Positive | 2974197 - 2975666 | 51772.7 |
| peptide-methionine (r)-s-oxide reductase | C5B85_13765 | Not Available | Positive | 2975872 - 2976327 | 16788.2 |
| peptide-methionine (s)-s-oxide reductase | C5B85_13770 | Not Available | Positive | 2976327 - 2976836 | 19004.9 |
| hypothetical protein | C5B85_13775 | Not Available | Negative | 2976932 - 2977432 | 18095.9 |
| iclr family transcriptional regulator | C5B85_13780 | Not Available | Negative | 2977684 - 2978487 | 28461.4 |
| catechol 1,2-dioxygenase | C5B85_13785 | Not Available | Positive | 2978610 - 2979632 | 37785.1 |
| short-chain dehydrogenase | C5B85_13790 | Not Available | Negative | 2979807 - 2980541 | 25721.3 |
| hypothetical protein | C5B85_13795 | Not Available | Positive | 2980741 - 2980953 | 7214.54 |
| hypothetical protein | C5B85_13800 | Not Available | Positive | 2980964 - 2981206 | 8412.21 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
