Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Pseudoclavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Pseudoclavibacter |
| Species | Pseudoclavibacter sp. AY1F1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
675024 bp
Thymine Count
677738 bp
Guanine Count
1377567 bp
Cytosine Count
1366552 bp
Genome Length
4097181 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxythreonine-4-phosphate dehydrogenase | C5B85_13705 | Not Available | Positive | 2962397 - 2963377 | 34202.4 |
| marr family transcriptional regulator | C5B85_13710 | Not Available | Negative | 2963532 - 2964692 | 40332.3 |
| alpha-galactosidase | C5B85_13715 | Not Available | Positive | 2964870 - 2967032 | 78550.1 |
| sugar abc transporter permease | C5B85_13720 | Not Available | Positive | 2967032 - 2967961 | 34366.3 |
| sugar abc transporter permease | C5B85_13725 | Not Available | Positive | 2967966 - 2968940 | 35319.7 |
| abc transporter substrate-binding protein | C5B85_13730 | Not Available | Positive | 2968982 - 2970331 | 48075.0 |
| hypothetical protein | C5B85_13735 | Not Available | Negative | 2970346 - 2970555 | 7158.72 |
| hypothetical protein | C5B85_13740 | Not Available | Negative | 2970590 - 2971030 | 16426.5 |
| laci family transcriptional regulator | C5B85_13745 | Not Available | Negative | 2971144 - 2972223 | 38141.1 |
| hydroxypyruvate isomerase | C5B85_13750 | Not Available | Negative | 2972220 - 2973047 | 29711.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
