Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Pseudoclavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Pseudoclavibacter |
| Species | Pseudoclavibacter sp. AY1F1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
675024 bp
Thymine Count
677738 bp
Guanine Count
1377567 bp
Cytosine Count
1366552 bp
Genome Length
4097181 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinyl-coa--3-ketoacid-coa transferase | C5B85_13450 | Not Available | Negative | 2914360 - 2915016 | 22592.4 |
| succinyl-coa--3-ketoacid-coa transferase | C5B85_13455 | Not Available | Negative | 2915016 - 2915843 | 28863.2 |
| 3-oxoadipate enol-lactonase | C5B85_13460 | Not Available | Negative | 2915836 - 2917161 | 45296.1 |
| hypothetical protein | C5B85_13465 | Not Available | Negative | 2917158 - 2918444 | 43614.6 |
| protocatechuate 3,4-dioxygenase subunit alpha | C5B85_13470 | Not Available | Negative | 2918447 - 2919055 | 21928.6 |
| protocatechuate 3,4-dioxygenase subunit beta | C5B85_13475 | Not Available | Negative | 2919048 - 2919851 | 29961.9 |
| 4-hydroxybenzoate 3-monooxygenase | C5B85_13480 | Not Available | Negative | 2919848 - 2921128 | 46604.5 |
| glycosyl hydrolase | C5B85_13485 | Not Available | Positive | 2921356 - 2923578 | 79230.0 |
| alpha/beta hydrolase | C5B85_13490 | Not Available | Positive | 2923575 - 2924471 | 31410.1 |
| sugar kinase | C5B85_13495 | Not Available | Negative | 2924560 - 2925792 | 42313.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
