Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Pseudoclavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Pseudoclavibacter |
| Species | Pseudoclavibacter sp. AY1F1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
675024 bp
Thymine Count
677738 bp
Guanine Count
1377567 bp
Cytosine Count
1366552 bp
Genome Length
4097181 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| choline dehydrogenase | C5B85_13350 | Not Available | Negative | 2893596 - 2895182 | 55289.1 |
| hydroxypyruvate isomerase | C5B85_13355 | Not Available | Negative | 2895179 - 2895973 | 28009.0 |
| lysr family transcriptional regulator | C5B85_13360 | Not Available | Positive | 2896442 - 2897380 | 34656.3 |
| acetyl-coa c-acyltransferase | C5B85_13365 | Not Available | Negative | 2897481 - 2898710 | 40638.0 |
| hydroxylase | C5B85_13370 | Not Available | Negative | 2898707 - 2899711 | 34930.0 |
| amidohydrolase | C5B85_13375 | Not Available | Negative | 2899726 - 2900811 | 38504.5 |
| 2-polyprenyl-6-methoxyphenol hydroxylase | C5B85_13380 | Not Available | Negative | 2900808 - 2901941 | 40097.3 |
| cyclase | C5B85_13385 | Not Available | Negative | 2902044 - 2903036 | 35537.4 |
| hydrolase | C5B85_13390 | Not Available | Negative | 2903099 - 2904130 | 37029.9 |
| prevent-host-death protein | C5B85_13395 | Not Available | Positive | 2904263 - 2904703 | 15842.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
