Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Pseudoclavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Pseudoclavibacter |
| Species | Pseudoclavibacter sp. AY1F1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
675024 bp
Thymine Count
677738 bp
Guanine Count
1377567 bp
Cytosine Count
1366552 bp
Genome Length
4097181 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C5B85_01260 | Not Available | Positive | 268729 - 269409 | 23501.7 |
| duf501 domain-containing protein | C5B85_01265 | Not Available | Positive | 269523 - 270011 | 17399.8 |
| nadh dehydrogenase fad-containing subunit | C5B85_01270 | Not Available | Positive | 270063 - 271586 | 53745.0 |
| Trna-leu | Not Available | Not Available | Positive | 271639 - 271715 | Not Available |
| shikimate 5-dehydrogenase | C5B85_01285 | Not Available | Positive | 272135 - 272950 | 28595.3 |
| sugar abc transporter atp-binding protein | C5B85_01290 | Not Available | Negative | 273025 - 274521 | 53142.6 |
| hypothetical protein | C5B85_01295 | Not Available | Positive | 275004 - 275372 | 12648.2 |
| hypothetical protein | C5B85_01300 | Not Available | Positive | 275564 - 276133 | 21051.0 |
| ai-2e family transporter | C5B85_01305 | Not Available | Positive | 276063 - 277406 | 47214.3 |
| threonine ammonia-lyase | C5B85_01310 | Not Available | Positive | 277403 - 278650 | 43845.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
