Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Pseudoclavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Pseudoclavibacter |
| Species | Pseudoclavibacter sp. AY1F1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
675024 bp
Thymine Count
677738 bp
Guanine Count
1377567 bp
Cytosine Count
1366552 bp
Genome Length
4097181 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l25 | C5B85_01210 | Not Available | Positive | 257172 - 257771 | 21541.6 |
| aminoacyl-trna hydrolase | C5B85_01215 | Not Available | Positive | 257905 - 258498 | 20640.5 |
| d-tyrosyl-trna(tyr) deacylase | C5B85_01220 | Not Available | Positive | 258495 - 258932 | 15383.6 |
| transcription-repair coupling factor | C5B85_01225 | Not Available | Positive | 259060 - 262617 | 129911.0 |
| nucleoside triphosphate pyrophosphohydrolase | C5B85_01230 | Not Available | Positive | 262653 - 263519 | 31032.5 |
| hypothetical protein | C5B85_01235 | Not Available | Negative | 263638 - 264864 | 45763.5 |
| hypothetical protein | C5B85_01240 | Not Available | Negative | 264861 - 265139 | 9527.58 |
| histidine--trna ligase | C5B85_01245 | Not Available | Positive | 265189 - 266502 | 46576.1 |
| hypothetical protein | C5B85_01250 | Not Available | Positive | 266683 - 267213 | 18944.4 |
| phosphopyruvate hydratase | C5B85_01255 | Not Available | Positive | 267316 - 268596 | 45445.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
