Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Pseudoclavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Pseudoclavibacter |
| Species | Pseudoclavibacter sp. AY1F1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
675024 bp
Thymine Count
677738 bp
Guanine Count
1377567 bp
Cytosine Count
1366552 bp
Genome Length
4097181 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine/betaine abc transporter permease | C5B85_12490 | Not Available | Positive | 2688811 - 2689788 | 34266.0 |
| glycine/betaine abc transporter substrate-binding protein | C5B85_12495 | Not Available | Positive | 2689833 - 2690729 | 32413.2 |
| peptidase | C5B85_12500 | Not Available | Negative | 2690796 - 2692514 | 60793.2 |
| hypothetical protein | C5B85_12505 | Not Available | Negative | 2692524 - 2693168 | 24595.2 |
| haloacid dehalogenase | C5B85_12510 | Not Available | Negative | 2693165 - 2693836 | 24360.0 |
| beta-glucosidase | C5B85_12515 | Not Available | Negative | 2693833 - 2695347 | 55884.7 |
| atp-dependent rna helicase | C5B85_12520 | Not Available | Negative | 2695448 - 2697274 | 66679.2 |
| tetr family transcriptional regulator | C5B85_12525 | Not Available | Negative | 2697264 - 2697905 | 22880.3 |
| agmatine deiminase | C5B85_12530 | Not Available | Positive | 2697987 - 2699045 | 38218.8 |
| amidase | C5B85_12535 | Not Available | Positive | 2699042 - 2700757 | 60660.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
