Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Pseudoclavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Pseudoclavibacter |
| Species | Pseudoclavibacter sp. AY1F1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
675024 bp
Thymine Count
677738 bp
Guanine Count
1377567 bp
Cytosine Count
1366552 bp
Genome Length
4097181 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C5B85_12140 | Not Available | Negative | 2603254 - 2605089 | 62943.5 |
| dna-directed rna polymerase subunit beta' | C5B85_12145 | Not Available | Negative | 2605216 - 2609094 | 142287.0 |
| dna-directed rna polymerase subunit beta | C5B85_12150 | Not Available | Negative | 2609143 - 2612631 | 128737.0 |
| duf1540 domain-containing protein | C5B85_12155 | Not Available | Positive | 2613060 - 2613347 | 9648.33 |
| cell wall protein | C5B85_12160 | Not Available | Positive | 2613502 - 2616126 | 89155.4 |
| hypothetical protein | C5B85_12165 | Not Available | Positive | 2616363 - 2617184 | 28915.8 |
| catalase | C5B85_12170 | Not Available | Negative | 2617294 - 2618790 | 55926.6 |
| transcriptional repressor | C5B85_12175 | Not Available | Negative | 2618846 - 2619310 | 16693.7 |
| spermine synthase | C5B85_12180 | Not Available | Positive | 2619395 - 2620291 | 31948.1 |
| sensor histidine kinase | C5B85_12185 | Not Available | Negative | 2620298 - 2621170 | 30804.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
