Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Pseudoclavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Pseudoclavibacter |
| Species | Pseudoclavibacter sp. AY1F1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
675024 bp
Thymine Count
677738 bp
Guanine Count
1377567 bp
Cytosine Count
1366552 bp
Genome Length
4097181 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transporter | C5B85_01160 | Not Available | Positive | 244285 - 245343 | 39940.7 |
| alpha/beta hydrolase | C5B85_01165 | Not Available | Positive | 245456 - 246394 | 33332.4 |
| nitrite reductase (nad(p)h) | C5B85_01170 | Not Available | Positive | 246713 - 249298 | 90550.0 |
| nitrite reductase (nad(p)h) small subunit | C5B85_01175 | Not Available | Positive | 249295 - 249714 | 14932.9 |
| uroporphyrinogen-iii c-methyltransferase | C5B85_01180 | Not Available | Positive | 249711 - 250946 | 42695.4 |
| uroporphyrinogen-iii synthase | C5B85_01185 | Not Available | Positive | 250943 - 252139 | 41476.4 |
| cobalamin biosynthesis protein cbix | C5B85_01190 | Not Available | Positive | 252319 - 253044 | 25004.7 |
| formate transporter | C5B85_01195 | Not Available | Positive | 253194 - 254060 | 30446.1 |
| phosphogluconate dehydrogenase (nadp(+)-dependent, decarboxylating) | C5B85_01200 | Not Available | Negative | 254470 - 255942 | 51916.1 |
| hypothetical protein | C5B85_01205 | Not Available | Positive | 256155 - 256994 | 28477.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
