Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Pseudoclavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Pseudoclavibacter |
| Species | Pseudoclavibacter sp. AY1F1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
675024 bp
Thymine Count
677738 bp
Guanine Count
1377567 bp
Cytosine Count
1366552 bp
Genome Length
4097181 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna pseudouridine(38-40) synthase trua | C5B85_11940 | Not Available | Negative | 2575138 - 2576061 | 33131.4 |
| 50s ribosomal protein l17 | C5B85_11945 | Not Available | Negative | 2576159 - 2576731 | 20244.9 |
| dna-directed rna polymerase subunit alpha | C5B85_11950 | Not Available | Negative | 2576777 - 2577772 | 35921.4 |
| 30s ribosomal protein s11 | C5B85_11955 | Not Available | Negative | 2577922 - 2578320 | 13845.6 |
| 30s ribosomal protein s13 | C5B85_11960 | Not Available | Negative | 2578363 - 2578737 | 14042.0 |
| 50s ribosomal protein l36 | C5B85_11965 | Not Available | Negative | 2578931 - 2579044 | 4373.59 |
| translation initiation factor if-1 | C5B85_11970 | Not Available | Negative | 2579114 - 2579335 | 8408.38 |
| type i methionyl aminopeptidase | C5B85_11975 | Not Available | Negative | 2579467 - 2580306 | 28860.2 |
| hypothetical protein | C5B85_11980 | Not Available | Negative | 2580387 - 2580605 | 7980.07 |
| carnitine dehydratase | C5B85_11985 | Not Available | Negative | 2580748 - 2581893 | 40294.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
