Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Pseudoclavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Pseudoclavibacter |
| Species | Pseudoclavibacter sp. AY1F1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
675024 bp
Thymine Count
677738 bp
Guanine Count
1377567 bp
Cytosine Count
1366552 bp
Genome Length
4097181 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| monooxygenase | C5B85_11425 | Not Available | Positive | 2458030 - 2458722 | 24478.2 |
| carotenoid biosynthesis protein | C5B85_11430 | Not Available | Positive | 2458820 - 2459659 | 29511.3 |
| phytoene desaturase | C5B85_11435 | Not Available | Positive | 2459656 - 2461212 | 55077.0 |
| duf1844 domain-containing protein | C5B85_11440 | Not Available | Negative | 2461325 - 2461699 | 13010.1 |
| translation initiation factor if-3 | C5B85_11445 | Not Available | Positive | 2461990 - 2462661 | 24754.3 |
| 50s ribosomal protein l35 | C5B85_11450 | Not Available | Positive | 2462661 - 2462855 | 7058.82 |
| 50s ribosomal protein l20 | C5B85_11455 | Not Available | Positive | 2462896 - 2463282 | 14448.6 |
| rna methyltransferase | C5B85_11460 | Not Available | Positive | 2463485 - 2464285 | 28399.7 |
| amino acid abc transporter permease | C5B85_11465 | Not Available | Negative | 2464666 - 2465673 | 36331.1 |
| amino acid abc transporter permease | C5B85_11470 | Not Available | Negative | 2465670 - 2466323 | 22970.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
