Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Pseudoclavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Pseudoclavibacter |
| Species | Pseudoclavibacter sp. AY1F1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
675024 bp
Thymine Count
677738 bp
Guanine Count
1377567 bp
Cytosine Count
1366552 bp
Genome Length
4097181 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | C5B85_11325 | Not Available | Positive | 2439532 - 2439843 | 11436.9 |
| duf3046 domain-containing protein | C5B85_11330 | Not Available | Positive | 2439935 - 2440165 | 8377.85 |
| recombinase reca | C5B85_11335 | Not Available | Positive | 2440423 - 2441502 | 38267.0 |
| hypothetical protein | C5B85_11340 | Not Available | Positive | 2441499 - 2442374 | 30963.8 |
| hypothetical protein | C5B85_11345 | Not Available | Negative | 2442336 - 2443361 | 35676.0 |
| trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miab | C5B85_11350 | Not Available | Positive | 2443345 - 2444868 | 55200.6 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | C5B85_11355 | Not Available | Positive | 2444865 - 2445782 | 33273.7 |
| diaminopimelate epimerase | C5B85_11360 | Not Available | Positive | 2445852 - 2446763 | 32033.0 |
| mfs transporter | C5B85_11365 | Not Available | Negative | 2446732 - 2447343 | 21806.1 |
| gtpase hflx | C5B85_11370 | Not Available | Positive | 2447380 - 2448903 | 55433.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
