Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Pseudoclavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Pseudoclavibacter |
| Species | Pseudoclavibacter sp. AY1F1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
675024 bp
Thymine Count
677738 bp
Guanine Count
1377567 bp
Cytosine Count
1366552 bp
Genome Length
4097181 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C5B85_11165 | Not Available | Positive | 2402739 - 2403149 | 14732.4 |
| mevalonate kinase | C5B85_11170 | Not Available | Positive | 2403215 - 2404222 | 34266.1 |
| diphosphomevalonate decarboxylase | C5B85_11175 | Not Available | Positive | 2404189 - 2405247 | 36193.8 |
| phosphomevalonate kinase | C5B85_11180 | Not Available | Positive | 2405244 - 2406332 | 37782.0 |
| type 2 isopentenyl-diphosphate delta-isomerase | C5B85_11185 | Not Available | Positive | 2406325 - 2407410 | 38099.2 |
| hydroxymethylglutaryl-coa reductase | C5B85_11190 | Not Available | Positive | 2407407 - 2408453 | 37865.0 |
| hydroxymethylglutaryl-coa synthase | C5B85_11195 | Not Available | Positive | 2408480 - 2409652 | 42289.3 |
| universal stress protein uspa | C5B85_11200 | Not Available | Positive | 2409684 - 2410526 | 28664.4 |
| hypothetical protein | C5B85_11205 | Not Available | Negative | 2410635 - 2410979 | 12430.4 |
| hypothetical protein | C5B85_11210 | Not Available | Positive | 2411230 - 2412159 | 32365.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
