Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Pseudoclavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Pseudoclavibacter |
| Species | Pseudoclavibacter sp. AY1F1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
675024 bp
Thymine Count
677738 bp
Guanine Count
1377567 bp
Cytosine Count
1366552 bp
Genome Length
4097181 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metallophosphatase | C5B85_10165 | Not Available | Negative | 2178978 - 2179856 | 31367.7 |
| penicillin-binding protein | C5B85_10170 | Not Available | Negative | 2180012 - 2182537 | 88401.8 |
| lysr family transcriptional regulator | C5B85_10175 | Not Available | Positive | 2182797 - 2183258 | 15679.9 |
| acetate--coa ligase | C5B85_10180 | Not Available | Negative | 2183381 - 2185348 | 71388.2 |
| type ii/type iv pathway secretion protein | C5B85_10185 | Not Available | Positive | 2185934 - 2187106 | 41259.3 |
| hypothetical protein | C5B85_10190 | Not Available | Positive | 2187118 - 2188143 | 35763.7 |
| duf4244 domain-containing protein | C5B85_10195 | Not Available | Positive | 2188204 - 2188422 | 7979.73 |
| hypothetical protein | C5B85_10200 | Not Available | Positive | 2188422 - 2188781 | 12471.3 |
| helicase | C5B85_10205 | Not Available | Positive | 2188778 - 2189128 | 11378.6 |
| type i dna topoisomerase | C5B85_10210 | Not Available | Positive | 2189298 - 2192195 | 104602.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
