Pseudoclavibacter sp. AY1F1

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Pseudoclavibacter

Description

Pseudoclavibacter sp. AY1F1 is characterized by a single replicon, indicating a streamlined genetic structure. The organism is cataloged under the accession number PSTQ00000000.1, which provides a reference point for further genetic and genomic studies related to this species. As a member of the genus Pseudoclavibacter, this bacterium may play a role in specific ecological niches, although detailed ecological interactions are not specified in the provided traits. The presence of only one replicon suggests a potential for stability in its genomic organization, which can be advantageous for survival in various environments. The simplified genetic architecture of Pseudoclavibacter sp. AY1F1 may also imply the potential for efficient metabolic processes, allowing it to adapt to available resources in its habitat. Understanding the specific traits and behaviors of this bacterium can contribute to broader insights into microbial communities and their functions in ecosystems. Further research could elucidate its role in nutrient cycling or its interactions with other microorganisms, highlighting the importance of studying such organisms to comprehend their ecological impacts.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusPseudoclavibacter
SpeciesPseudoclavibacter sp. AY1F1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoclavibacter sp. AY1F1 AY1F1_119, whole genome shotgun

Gene Summary

Adenine Count

675024 bp

Thymine Count

677738 bp

Guanine Count

1377567 bp

Cytosine Count

1366552 bp

Genome Length

4097181 bp

Protein-coding Genes

3655 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
aspartate aminotransferaseC5B85_09910Not AvailableNegative2125714 - 212709949328.7
Trna-trpNot AvailableNot AvailablePositive2127115 - 2127187Not Available
preprotein translocase subunit seceC5B85_09920Not AvailablePositive2127258 - 212756911209.8
transcription termination/antitermination protein nusgC5B85_09925Not AvailablePositive2127645 - 212857434413.9
50s ribosomal protein l11C5B85_09930Not AvailablePositive2128714 - 212914514977.2
50s ribosomal protein l1C5B85_09935Not AvailablePositive2129249 - 212993523914.7
2-isopropylmalate synthaseC5B85_09940Not AvailableNegative2130033 - 213181465933.0
gntr family transcriptional regulatorC5B85_09945Not AvailablePositive2131994 - 213266224066.8
nadph:quinone reductaseC5B85_09950Not AvailableNegative2132700 - 213366233832.5
recombinaseC5B85_09955Not AvailableNegative2133735 - 213442125997.5

Displaying genes 1951 – 1960 of 3706 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.