Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Pseudoclavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Pseudoclavibacter |
| Species | Pseudoclavibacter sp. AY1F1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
675024 bp
Thymine Count
677738 bp
Guanine Count
1377567 bp
Cytosine Count
1366552 bp
Genome Length
4097181 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna repair protein recn | C5B85_09445 | Not Available | Negative | 2037348 - 2039117 | 61706.6 |
| nad kinase | C5B85_09450 | Not Available | Negative | 2039114 - 2040037 | 32974.6 |
| tlya family rrna (cytidine-2'-o)-methyltransferase | C5B85_09455 | Not Available | Negative | 2040034 - 2040915 | 30614.6 |
| haloacid dehalogenase | C5B85_09460 | Not Available | Negative | 2041082 - 2042119 | 36381.6 |
| peptidase | C5B85_09470 | Not Available | Negative | 2044392 - 2044955 | 20472.2 |
| 2-keto-gluconate dehydrogenase | C5B85_09480 | Not Available | Positive | 2045991 - 2047592 | 58089.6 |
| iclr family transcriptional regulator | C5B85_09485 | Not Available | Positive | 2047602 - 2048519 | 32656.9 |
| hypothetical protein | C5B85_09490 | Not Available | Negative | 2048543 - 2049061 | 17065.3 |
| hypothetical protein | C5B85_09495 | Not Available | Negative | 2049064 - 2049294 | 8337.96 |
| dna topoisomerase | C5B85_09500 | Not Available | Positive | 2049498 - 2050475 | 35967.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
