Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Pseudoclavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Pseudoclavibacter |
| Species | Pseudoclavibacter sp. AY1F1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
675024 bp
Thymine Count
677738 bp
Guanine Count
1377567 bp
Cytosine Count
1366552 bp
Genome Length
4097181 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1304 domain-containing protein | C5B85_09295 | Not Available | Negative | 2008239 - 2008643 | 13828.3 |
| tetr/acrr family transcriptional regulator | C5B85_09300 | Not Available | Positive | 2008698 - 2009258 | 19821.3 |
| arsr family transcriptional regulator | C5B85_09305 | Not Available | Positive | 2009413 - 2009784 | 13272.6 |
| polyketide cyclase | C5B85_09310 | Not Available | Positive | 2009781 - 2010266 | 17944.9 |
| glycosyl transferase family 1 | C5B85_09315 | Not Available | Negative | 2010452 - 2011741 | 45636.9 |
| glycoside hydrolase | C5B85_09320 | Not Available | Negative | 2011738 - 2014020 | 83278.9 |
| hypothetical protein | C5B85_09325 | Not Available | Negative | 2014133 - 2015032 | 33524.4 |
| marr family transcriptional regulator | C5B85_09330 | Not Available | Negative | 2015016 - 2015423 | 14767.7 |
| hypothetical protein | C5B85_09335 | Not Available | Positive | 2015513 - 2016439 | 33277.1 |
| dimethylmenaquinone methyltransferase | C5B85_09340 | Not Available | Negative | 2016455 - 2017168 | 25974.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
