Pseudoclavibacter sp. AY1F1

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Pseudoclavibacter

Description

Pseudoclavibacter sp. AY1F1 is characterized by a single replicon, indicating a streamlined genetic structure. The organism is cataloged under the accession number PSTQ00000000.1, which provides a reference point for further genetic and genomic studies related to this species. As a member of the genus Pseudoclavibacter, this bacterium may play a role in specific ecological niches, although detailed ecological interactions are not specified in the provided traits. The presence of only one replicon suggests a potential for stability in its genomic organization, which can be advantageous for survival in various environments. The simplified genetic architecture of Pseudoclavibacter sp. AY1F1 may also imply the potential for efficient metabolic processes, allowing it to adapt to available resources in its habitat. Understanding the specific traits and behaviors of this bacterium can contribute to broader insights into microbial communities and their functions in ecosystems. Further research could elucidate its role in nutrient cycling or its interactions with other microorganisms, highlighting the importance of studying such organisms to comprehend their ecological impacts.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusPseudoclavibacter
SpeciesPseudoclavibacter sp. AY1F1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoclavibacter sp. AY1F1 AY1F1_119, whole genome shotgun

Gene Summary

Adenine Count

675024 bp

Thymine Count

677738 bp

Guanine Count

1377567 bp

Cytosine Count

1366552 bp

Genome Length

4097181 bp

Protein-coding Genes

3655 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
serine hydrolaseC5B85_09145Not AvailableNegative1981143 - 198236042577.4
hypothetical proteinC5B85_09150Not AvailableNegative1982502 - 19827147947.95
hypothetical proteinC5B85_09155Not AvailableNegative1982839 - 198385535902.4
agmatinaseC5B85_09160Not AvailableNegative1984092 - 198503933714.9
zn-dependent hydrolaseC5B85_09165Not AvailableNegative1985632 - 198695446505.5
2-hydroxyacid dehydrogenaseC5B85_09170Not AvailableNegative1986951 - 198792533772.2
ectoine/hydroxyectoine abc transporter atp-binding protein ehuaC5B85_09175Not AvailableNegative1987936 - 198871828415.7
abc transporter permeaseC5B85_09180Not AvailableNegative1988718 - 198968334501.0
hypothetical proteinC5B85_09185Not AvailableNegative1989724 - 199061430531.6
xre family transcriptional regulatorC5B85_09190Not AvailableNegative1990808 - 199140121544.6

Displaying genes 1801 – 1810 of 3706 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.