Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Pseudoclavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Pseudoclavibacter |
| Species | Pseudoclavibacter sp. AY1F1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
675024 bp
Thymine Count
677738 bp
Guanine Count
1377567 bp
Cytosine Count
1366552 bp
Genome Length
4097181 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| eama family transporter | C5B85_08060 | Not Available | Positive | 1740960 - 1741940 | 34467.2 |
| 5,10-methylene tetrahydromethanopterin reductase | C5B85_08065 | Not Available | Positive | 1742023 - 1743189 | 43697.7 |
| nadh-dependent fmn reductase | C5B85_08070 | Not Available | Positive | 1743310 - 1743984 | 23777.5 |
| hypothetical protein | C5B85_08075 | Not Available | Positive | 1744163 - 1744729 | 19455.2 |
| aspartate aminotransferase family protein | C5B85_08080 | Not Available | Negative | 1744913 - 1746232 | 47155.1 |
| pucr family transcriptional regulator | C5B85_08085 | Not Available | Positive | 1746254 - 1747951 | 60399.3 |
| hypothetical protein | C5B85_08090 | Not Available | Negative | 1747981 - 1748460 | 18092.2 |
| methylmalonate-semialdehyde dehydrogenase (coa acylating) | C5B85_08095 | Not Available | Negative | 1748591 - 1750111 | 54062.4 |
| succinate-semialdehyde dehydrogenase | C5B85_08105 | Not Available | Positive | 1750390 - 1751766 | 49038.1 |
| pyridoxamine 5-phosphate oxidase | C5B85_08110 | Not Available | Positive | 1751782 - 1752345 | 19850.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
