Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Pseudoclavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Pseudoclavibacter |
| Species | Pseudoclavibacter sp. AY1F1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
675024 bp
Thymine Count
677738 bp
Guanine Count
1377567 bp
Cytosine Count
1366552 bp
Genome Length
4097181 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | C5B85_07305 | Not Available | Positive | 1585599 - 1585946 | 12150.5 |
| hypothetical protein | C5B85_07310 | Not Available | Negative | 1585957 - 1587111 | 39347.6 |
| hypothetical protein | C5B85_07315 | Not Available | Negative | 1587163 - 1588068 | 31824.1 |
| hypothetical protein | C5B85_07320 | Not Available | Negative | 1588068 - 1589150 | 37404.0 |
| alkanal monooxygenase | C5B85_07325 | Not Available | Positive | 1589375 - 1590448 | 38529.7 |
| sam-dependent methyltransferase | C5B85_07330 | Not Available | Positive | 1590491 - 1592182 | 61192.1 |
| formyl-coa transferase | C5B85_07335 | Not Available | Positive | 1592189 - 1593478 | 45233.5 |
| hydroxymethylglutaryl-coa lyase | C5B85_07340 | Not Available | Positive | 1593475 - 1594407 | 32627.9 |
| hypothetical protein | C5B85_07345 | Not Available | Negative | 1594453 - 1594872 | 15202.7 |
| cpbp family intramembrane metalloprotease domain-containing protein | C5B85_07350 | Not Available | Negative | 1595106 - 1596050 | 33468.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
