Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Pseudoclavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Pseudoclavibacter |
| Species | Pseudoclavibacter sp. AY1F1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
675024 bp
Thymine Count
677738 bp
Guanine Count
1377567 bp
Cytosine Count
1366552 bp
Genome Length
4097181 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent oxidoreductase | C5B85_07155 | Not Available | Negative | 1553205 - 1554062 | 29295.2 |
| formaldehyde dehydrogenase, glutathione-independent | C5B85_07160 | Not Available | Positive | 1554322 - 1555536 | 42236.4 |
| alpha/beta hydrolase | C5B85_07165 | Not Available | Positive | 1555780 - 1556604 | 28419.8 |
| duf3253 domain-containing protein | C5B85_07170 | Not Available | Positive | 1556601 - 1556879 | 9683.43 |
| hypothetical protein | C5B85_07175 | Not Available | Negative | 1557020 - 1557271 | 9236.87 |
| hypothetical protein | C5B85_07180 | Not Available | Negative | 1557281 - 1559554 | 82865.0 |
| marr family transcriptional regulator | C5B85_07185 | Not Available | Positive | 1559742 - 1560200 | 16650.8 |
| mate family efflux transporter | C5B85_07190 | Not Available | Positive | 1560291 - 1561763 | 49480.6 |
| heavy metal translocating p-type atpase | C5B85_07195 | Not Available | Negative | 1561897 - 1564029 | 73831.0 |
| hypothetical protein | C5B85_07200 | Not Available | Positive | 1564270 - 1564626 | 12798.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
