Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Pseudoclavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Pseudoclavibacter |
| Species | Pseudoclavibacter sp. AY1F1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
675024 bp
Thymine Count
677738 bp
Guanine Count
1377567 bp
Cytosine Count
1366552 bp
Genome Length
4097181 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C5B85_06840 | Not Available | Positive | 1491106 - 1491459 | 12175.7 |
| hypothetical protein | C5B85_06845 | Not Available | Positive | 1491456 - 1492922 | 49864.6 |
| carboxylate transporter | C5B85_06850 | Not Available | Positive | 1493031 - 1494629 | 55808.5 |
| hypothetical protein | C5B85_06855 | Not Available | Negative | 1494630 - 1495049 | 15116.9 |
| pyruvate dehydrogenase (acetyl-transferring) e1 component subunit alpha | C5B85_06860 | Not Available | Positive | 1495193 - 1496323 | 41759.3 |
| alpha-ketoacid dehydrogenase subunit beta | C5B85_06865 | Not Available | Positive | 1496320 - 1497372 | 37483.6 |
| branched-chain alpha-keto acid dehydrogenase subunit e2 | C5B85_06870 | Not Available | Positive | 1497405 - 1498844 | 50750.5 |
| hypothetical protein | C5B85_06875 | Not Available | Positive | 1499034 - 1499780 | 25185.4 |
| eama family transporter | C5B85_06880 | Not Available | Negative | 1499782 - 1500627 | 29041.8 |
| lysr family transcriptional regulator | C5B85_06885 | Not Available | Positive | 1500813 - 1501721 | 32935.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
