Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Pseudoclavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Pseudoclavibacter |
| Species | Pseudoclavibacter sp. AY1F1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
675024 bp
Thymine Count
677738 bp
Guanine Count
1377567 bp
Cytosine Count
1366552 bp
Genome Length
4097181 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| plasmid stabilization protein | C5B85_06735 | Not Available | Positive | 1468954 - 1469181 | 8496.1 |
| vapc toxin family pin domain ribonuclease | C5B85_06740 | Not Available | Positive | 1469178 - 1469612 | 16180.3 |
| mfs transporter | C5B85_06745 | Not Available | Positive | 1469657 - 1470979 | 45884.7 |
| protein-tyrosine-phosphatase | C5B85_06750 | Not Available | Positive | 1470989 - 1471801 | 27711.1 |
| eama family transporter | C5B85_06755 | Not Available | Negative | 1471742 - 1472713 | 33012.2 |
| lysr family transcriptional regulator | C5B85_06760 | Not Available | Positive | 1472839 - 1473735 | 32688.2 |
| hypothetical protein | C5B85_06765 | Not Available | Negative | 1473959 - 1476640 | 94141.5 |
| dna-binding response regulator | C5B85_06775 | Not Available | Negative | 1478211 - 1478855 | 22674.4 |
| two-component sensor histidine kinase | C5B85_06780 | Not Available | Negative | 1478852 - 1480258 | 48492.3 |
| peptide abc transporter atp-binding protein | C5B85_06785 | Not Available | Positive | 1480188 - 1480979 | 27525.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
