Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Pseudoclavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Pseudoclavibacter |
| Species | Pseudoclavibacter sp. AY1F1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
675024 bp
Thymine Count
677738 bp
Guanine Count
1377567 bp
Cytosine Count
1366552 bp
Genome Length
4097181 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf721 domain-containing protein | C5B85_06525 | Not Available | Negative | 1421336 - 1421824 | 17616.9 |
| dna replication/repair protein recf | C5B85_06530 | Not Available | Negative | 1421817 - 1423028 | 43788.2 |
| dna polymerase iii subunit beta | C5B85_06535 | Not Available | Negative | 1423032 - 1424171 | 40655.5 |
| chromosomal replication initiator protein dnaa | C5B85_06540 | Not Available | Negative | 1424650 - 1426158 | 55515.6 |
| 50s ribosomal protein l34 | C5B85_06545 | Not Available | Positive | 1426539 - 1426676 | 5354.62 |
| ribonuclease p protein component | C5B85_06550 | Not Available | Positive | 1426681 - 1427073 | 14478.4 |
| membrane protein insertion efficiency factor yidd | C5B85_06555 | Not Available | Positive | 1427075 - 1427380 | 11037.4 |
| membrane protein insertase yidc | C5B85_06560 | Not Available | Positive | 1427402 - 1428412 | 37247.0 |
| dna-binding protein | C5B85_06565 | Not Available | Positive | 1428455 - 1428964 | 18143.8 |
| 16s rrna (guanine(527)-n(7))-methyltransferase rsmg | C5B85_06570 | Not Available | Positive | 1429246 - 1429884 | 23278.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
