Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Pseudoclavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Pseudoclavibacter |
| Species | Pseudoclavibacter sp. AY1F1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
675024 bp
Thymine Count
677738 bp
Guanine Count
1377567 bp
Cytosine Count
1366552 bp
Genome Length
4097181 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uroporphyrinogen decarboxylase | C5B85_06275 | Not Available | Negative | 1367971 - 1369080 | 39301.9 |
| glutamyl-trna reductase | C5B85_06280 | Not Available | Positive | 1369248 - 1370591 | 47283.2 |
| hypothetical protein | C5B85_06285 | Not Available | Positive | 1370867 - 1371367 | 16564.2 |
| peptidase m13 | C5B85_06290 | Not Available | Negative | 1371495 - 1373507 | 74960.1 |
| mate family efflux transporter | C5B85_06295 | Not Available | Positive | 1373627 - 1374988 | 46333.2 |
| hypothetical protein | C5B85_06300 | Not Available | Positive | 1375193 - 1376281 | 38398.7 |
| hypothetical protein | C5B85_06305 | Not Available | Negative | 1376289 - 1377425 | 40188.5 |
| lysine transporter lyse | C5B85_06310 | Not Available | Positive | 1377560 - 1378192 | 21605.3 |
| endonuclease nucs | C5B85_06315 | Not Available | Positive | 1378312 - 1379007 | 25246.5 |
| haloacid dehalogenase | C5B85_06320 | Not Available | Positive | 1379101 - 1379844 | 26323.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
