Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Pseudoclavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Pseudoclavibacter |
| Species | Pseudoclavibacter sp. AY1F1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
675024 bp
Thymine Count
677738 bp
Guanine Count
1377567 bp
Cytosine Count
1366552 bp
Genome Length
4097181 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C5B85_05770 | Not Available | Positive | 1262192 - 1262668 | 17702.4 |
| nad-dependent dna ligase liga | C5B85_05775 | Not Available | Positive | 1262665 - 1265043 | 85964.9 |
| hypothetical protein | C5B85_05780 | Not Available | Positive | 1265153 - 1267588 | 84876.8 |
| asp-trna(asn)/glu-trna(gln) amidotransferase gatcab subunit c | C5B85_05785 | Not Available | Positive | 1267679 - 1267978 | 10677.6 |
| asp-trna(asn)/glu-trna(gln) amidotransferase gatcab subunit a | C5B85_05790 | Not Available | Positive | 1267975 - 1269501 | 52630.0 |
| asp-trna(asn)/glu-trna(gln) amidotransferase gatcab subunit b | C5B85_05795 | Not Available | Positive | 1269501 - 1271015 | 54587.5 |
| hypothetical protein | C5B85_05805 | Not Available | Negative | 1271434 - 1271847 | 13893.4 |
| hypothetical protein | C5B85_05810 | Not Available | Positive | 1271918 - 1272718 | 26844.2 |
| long-chain fatty acid--coa ligase | C5B85_05815 | Not Available | Negative | 1272788 - 1274536 | 62960.6 |
| dna polymerase iv | C5B85_05820 | Not Available | Positive | 1274620 - 1275915 | 46968.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
