Pseudoclavibacter sp. AY1F1

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Pseudoclavibacter

Description

Pseudoclavibacter sp. AY1F1 is characterized by a single replicon, indicating a streamlined genetic structure. The organism is cataloged under the accession number PSTQ00000000.1, which provides a reference point for further genetic and genomic studies related to this species. As a member of the genus Pseudoclavibacter, this bacterium may play a role in specific ecological niches, although detailed ecological interactions are not specified in the provided traits. The presence of only one replicon suggests a potential for stability in its genomic organization, which can be advantageous for survival in various environments. The simplified genetic architecture of Pseudoclavibacter sp. AY1F1 may also imply the potential for efficient metabolic processes, allowing it to adapt to available resources in its habitat. Understanding the specific traits and behaviors of this bacterium can contribute to broader insights into microbial communities and their functions in ecosystems. Further research could elucidate its role in nutrient cycling or its interactions with other microorganisms, highlighting the importance of studying such organisms to comprehend their ecological impacts.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusPseudoclavibacter
SpeciesPseudoclavibacter sp. AY1F1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoclavibacter sp. AY1F1 AY1F1_119, whole genome shotgun

Gene Summary

Adenine Count

675024 bp

Thymine Count

677738 bp

Guanine Count

1377567 bp

Cytosine Count

1366552 bp

Genome Length

4097181 bp

Protein-coding Genes

3655 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
5-deoxy-glucuronate isomeraseC5B85_05515Not AvailableNegative1205730 - 120666233730.2
methylmalonate-semialdehyde dehydrogenase (coa acylating)C5B85_05520Not AvailableNegative1206728 - 120825154195.4
deoxyribose-phosphate aldolaseC5B85_05525Not AvailableNegative1208340 - 120924832159.5
5-dehydro-2-deoxygluconokinaseC5B85_05530Not AvailableNegative1209241 - 121020934370.7
glutamate--cysteine ligaseC5B85_05535Not AvailableNegative1210327 - 121143040667.8
hypothetical proteinC5B85_05540Not AvailablePositive1211541 - 12117627850.33
30s ribosomal protein s16C5B85_05545Not AvailablePositive1211907 - 121232315089.0
kh domain-containing proteinC5B85_05550Not AvailablePositive1212326 - 12125568254.89
ribosome maturation factor rimmC5B85_05555Not AvailablePositive1212558 - 121315721752.7
trna (guanosine(37)-n1)-methyltransferase trmdC5B85_05560Not AvailablePositive1213232 - 121400828414.6

Displaying genes 1091 – 1100 of 3706 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.