Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Pseudoclavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Pseudoclavibacter |
| Species | Pseudoclavibacter sp. AY1F1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
675024 bp
Thymine Count
677738 bp
Guanine Count
1377567 bp
Cytosine Count
1366552 bp
Genome Length
4097181 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-deoxy-glucuronate isomerase | C5B85_05515 | Not Available | Negative | 1205730 - 1206662 | 33730.2 |
| methylmalonate-semialdehyde dehydrogenase (coa acylating) | C5B85_05520 | Not Available | Negative | 1206728 - 1208251 | 54195.4 |
| deoxyribose-phosphate aldolase | C5B85_05525 | Not Available | Negative | 1208340 - 1209248 | 32159.5 |
| 5-dehydro-2-deoxygluconokinase | C5B85_05530 | Not Available | Negative | 1209241 - 1210209 | 34370.7 |
| glutamate--cysteine ligase | C5B85_05535 | Not Available | Negative | 1210327 - 1211430 | 40667.8 |
| hypothetical protein | C5B85_05540 | Not Available | Positive | 1211541 - 1211762 | 7850.33 |
| 30s ribosomal protein s16 | C5B85_05545 | Not Available | Positive | 1211907 - 1212323 | 15089.0 |
| kh domain-containing protein | C5B85_05550 | Not Available | Positive | 1212326 - 1212556 | 8254.89 |
| ribosome maturation factor rimm | C5B85_05555 | Not Available | Positive | 1212558 - 1213157 | 21752.7 |
| trna (guanosine(37)-n1)-methyltransferase trmd | C5B85_05560 | Not Available | Positive | 1213232 - 1214008 | 28414.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
