Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Pseudoclavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Pseudoclavibacter |
| Species | Pseudoclavibacter sp. AY1F1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
675024 bp
Thymine Count
677738 bp
Guanine Count
1377567 bp
Cytosine Count
1366552 bp
Genome Length
4097181 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-ketoglutarate transporter | C5B85_05100 | Not Available | Negative | 1109180 - 1110568 | 50369.6 |
| dna-binding response regulator | C5B85_05105 | Not Available | Positive | 1110743 - 1111405 | 24054.2 |
| sensor histidine kinase | C5B85_05110 | Not Available | Positive | 1111402 - 1112820 | 51101.8 |
| trap transporter substrate-binding protein | C5B85_05115 | Not Available | Positive | 1112814 - 1113752 | 31831.2 |
| duf445 domain-containing protein | C5B85_05120 | Not Available | Negative | 1113802 - 1115073 | 46046.0 |
| hypothetical protein | C5B85_05125 | Not Available | Positive | 1115180 - 1115467 | 10124.2 |
| hypothetical protein | C5B85_05130 | Not Available | Positive | 1115725 - 1117356 | 58834.1 |
| cof-type had-iib family hydrolase | C5B85_05135 | Not Available | Negative | 1117928 - 1118737 | 28994.0 |
| plp-dependent aminotransferase family protein | C5B85_05140 | Not Available | Negative | 1118740 - 1120206 | 52681.2 |
| hypothetical protein | C5B85_05145 | Not Available | Positive | 1120851 - 1121663 | 28272.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
