Pseudoclavibacter sp. RFBG4

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Pseudoclavibacter

Description

Pseudoclavibacter sp. RFBG4 is characterized by having a single replicon, indicating a streamlined genomic architecture that may contribute to its adaptability and functional efficiency. The genomic data for this organism is cataloged under the accession number PSYC00000000.1, which serves as a reference for researchers studying its genetic makeup and potential applications. The presence of a single replicon can suggest a stable genetic structure, which may provide advantages in specific environments, such as reduced genetic load and simplified regulation of gene expression. This trait is often observed in some microbial species that thrive in particular ecological niches, allowing them to maintain essential functions without the complexities associated with multiple replicons. In terms of ecological insight, the streamlined genome of Pseudoclavibacter sp. RFBG4 may facilitate its survival in environments with limited resources or specific challenges. The organism's genetic simplicity could enable quick adaptation to changing conditions, enhancing its ecological resilience. Such traits are crucial for microorganisms that inhabit diverse and often fluctuating environments, where competition and resource availability can impact survival and proliferation.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusPseudoclavibacter
SpeciesPseudoclavibacter sp. RFBG4
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoclavibacter sp. RFBG4 RFBG4_704, whole genome shotgun

Gene Summary

Adenine Count

635454 bp

Thymine Count

640454 bp

Guanine Count

1381739 bp

Cytosine Count

1376795 bp

Genome Length

4034452 bp

Protein-coding Genes

3611 genes

Non-Coding Genes

83 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Gp4, phage portal protein, hk97 familyC5E10_18075Not AvailableNegative3892695 - 389460269643.9
TerminaseC5E10_18080Not AvailableNegative3894595 - 389612755723.4
16s ribosomal rnaNot AvailableNot AvailablePositive237 - 1763Not Available
hypothetical proteinC5E10_00005Not AvailablePositive247 - 90921131.8
histidinol phosphataseC5E10_00010Not AvailableNegative990 - 175727090.4
23s ribosomal rnaNot AvailableNot AvailablePositive2177 - 5290Not Available
iron abc transporter permeaseC5E10_00015Not AvailableNegative1754 - 272532835.1
abc transporter substrate-binding proteinC5E10_00020Not AvailableNegative2836 - 389437474.3
short-chain dehydrogenaseC5E10_00025Not AvailableNegative4054 - 496531681.2
marr family transcriptional regulatorC5E10_00030Not AvailablePositive5120 - 555115501.5

Displaying genes 41 – 50 of 3694 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.